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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_64308283_64308457_F

Intron Information:

Intron Rank:
142519
Intron Class:
major
Intron Phase:
Intron Coordinates:
64308283 - 64308457
Intron Length:
175

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGTGTAGA
5'SS Class:
strong_major
3'SS Sequence:
ATTTTCATCCTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TTATTTTTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.9
0.8
0.9
75.8
35.3
Major BPS
100
1.24
0.5
100
0
Major PPT
75.1
0.56
0.8
67.6
38.3
Minor 5ss
35.7
-1.6
2.6
42.3
44.5
Minor BPS
64.7
0.54
1.5
79.8
36.8

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026798
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000040690
64307938 - 64318006
10069
ENSAPLT00000029948
64307938 - 64318006
10069