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Intron Name: Anas_platyrhynchos_platyrhynchos_4_64308534_64317429_F

Intron Information:

Intron Rank:

142520

Intron Class:

major

Intron Phase:

Intron Coordinates:

64308534 - 64317429

Intron Length:

8896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTGTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTAGGTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

0.77

0.9

84.8

35.4

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

46.2

-0.2

2.6

76.23

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040690

64307938 - 64318006

10069

ENSAPLT00000029948

64307938 - 64318006

10069