Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_64608243_64611827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64608243 - 64611827

Intron Length:

3585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAATA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATTTTTCAATG

Flanking Amino Acid:

TLANILWREQGLGIGNMFYV

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

73.8

36.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.3

0.64

0.9

83.9

24.8

Minor 5ss

36.1

-1.6

3.2

49.5

46.3

Minor BPS

59.5

0.16

1.5

64.08

38.4

Associated Gene:

Gene:

FSTL5

Ensembl Gene ID:

ENSAPLG00000002939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040593

64571280 - 64927863

356584

ENSAPLT00000034772

64570280 - 64762262

191983