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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65079293_65083661_R

Intron Information:

Intron Rank:

130443

Intron Class:

major

Intron Phase:

Intron Coordinates:

65079293 - 65083661

Intron Length:

4369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTTTCCCATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.6

40.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

80.6

0.69

0.9

36.8

Minor 5ss

31.4

-2.1

2.7

33.7

35.3

Minor BPS

48.6

-0

2.1

76.5

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021230

65079021 - 65092170

13150