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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65188412_65227689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65188412 - 65227689

Intron Length:

39278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAACT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TCACTGTTAACA

Flanking Amino Acid:

DAVVVPVAQTVHLPLQIVTH

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

71.6

38.1

Major BPS

0.52

1.1

77.7

35.3

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

34.4

-1.8

3.3

50.3

45.7

Minor BPS

52.8

0.08

2.1

65.02

41.4

Associated Gene:

Gene:

MARCHF1

Ensembl Gene ID:

ENSAPLG00000003514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032504

65188284 - 65261794

73511