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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65227936_65231111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65227936 - 65231111

Intron Length:

3176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTATTTCAAAG

Flanking Amino Acid:

AEEIKQGNDNGVLEWPFWTK

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

70.8

0.52

70.6

31.6

Major PPT

76.7

0.6

78.4

33.6

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

50.5

-0.1

1.7

61.26

40.6

Associated Gene:

Gene:

MARCHF1

Ensembl Gene ID:

ENSAPLG00000003514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003582

65227634 - 65427130

199497

ENSAPLT00000038585

65227634 - 65382356

154723

ENSAPLT00000032504

65188284 - 65261794

73511