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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65261684_65274104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65261684 - 65274104

Intron Length:

12421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

CTTATTTCAACA

Flanking Amino Acid:

STSRSSNISKASSPTTGTAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

77.6

0.62

0.9

73.5

35.7

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

57.2

0.22

1.6

67.56

39.2

Associated Gene:

Gene:

MARCHF1

Ensembl Gene ID:

ENSAPLG00000003514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038585

65227634 - 65382356

154723

ENSAPLT00000003582

65227634 - 65427130

199497