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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65318482_65382171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

65318482 - 65382171

Intron Length:

63690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

AAATTATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

GGACTCTAAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

74.2

0.6

0.9

75.7

Major PPT

75.1

0.56

43.4

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

49.9

0.07

1.6

63.55

40.6

Associated Gene:

Gene:

MARCHF1

Ensembl Gene ID:

ENSAPLG00000003514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038585

65227634 - 65382356

154723

ENSAPLT00000003582

65227634 - 65427130

199497