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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65664568_65674378_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
65664568 - 65674378

Intron Length:
9811

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
CAG|GCAAGTTAT

5'SS Class:
strong_major

3'SS Sequence:
TTCCTCCAAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACACAT

U12 Branch Point Sequence:
TTTTCCTCCAAA

Flanking Amino Acid:
DLLNKANTYAEQHFSDVVLS

Intron Amino Acid Position:
181

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.9
1.13
0.7
84
30.2

Major BPS
69.9
0.49
1
75.2
29.8

Major PPT
70.5
0.46
0.9
66.5
33.4

Minor 5ss
31.5
-2.1
4
48.7
47.5

Minor BPS
57.1
0.22
2.1
77.18
39.5

Associated Gene:

Gene:
KLHL2

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

65630471 - 65685991
55521