Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_65674489_65675922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65674489 - 65675922

Intron Length:

1434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAA

U12 Branch Point Sequence:

GTTTTCTGGAAG

Flanking Amino Acid:

DKLTIASEEKVFEAVIAWVN

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

0.23

1.1

61.4

36.2

Major PPT

68.4

0.41

1.2

71.9

38.4

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

51.5

-0.1

1.7

60.93

40.6

Associated Gene:

Gene:

KLHL2

Ensembl Gene ID:

ENSAPLG00000003706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003861

65630471 - 65685991

55521