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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65690323_65692089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65690323 - 65692089

Intron Length:

1767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTACGTATT

5'SS Class:

major

3'SS Sequence:

TATCGTTTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TGTCTGTTATCG

Flanking Amino Acid:

YIHKVHHEFVSPFGMQAEYA

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

77.5

37.2

Major BPS

0.47

1.2

61.1

45.5

Major PPT

78.6

0.64

0.8

73.4

36.7

Minor 5ss

42.5

-0.8

3.1

61.3

38.3

Minor BPS

-0.4

2.3

57.05

44.4

Associated Gene:

Gene:

MSMO1

Ensembl Gene ID:

ENSAPLG00000004461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004590

65687034 - 65693962

6929