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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65979654_65983670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65979654 - 65983670

Intron Length:

4017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

HSNERLGHNTGGFGEHGMSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

79.4

29.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.8

0.69

82.3

33.1

Minor 5ss

45.7

-0.5

2.9

64.3

47.2

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

TLL1

Ensembl Gene ID:

ENSAPLG00000013257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024678

65922058 - 66049390

127333

ENSAPLT00000013904

65923554 - 66049390

125837