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Intron Name: Anas_platyrhynchos_platyrhynchos_4_65987820_65996724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65987820 - 65996724

Intron Length:

8905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATT

Flanking Amino Acid:

SYIVFTYRPCGCCSYVGRRG

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.1

0.7

0.9

74.2

39.4

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

68.4

0.66

1.3

79.54

37.3

Associated Gene:

Gene:

TLL1

Ensembl Gene ID:

ENSAPLG00000013257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024678

65922058 - 66049390

127333

ENSAPLT00000013904

65923554 - 66049390

125837