Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_65996904_65998774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65996904 - 65998774

Intron Length:

1871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATAT

5'SS Class:

strong_major

3'SS Sequence:

CAATCATCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TAATTATCAATC

Flanking Amino Acid:

VTIIRENIQPGQEYNFLKME

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

82.9

Major BPS

0.72

80.3

31.7

Major PPT

66.1

0.36

0.9

59.4

36.5

Minor 5ss

34.2

-1.8

3.2

46.6

48.7

Minor BPS

49.7

-0

1.7

61.87

37.1

Associated Gene:

Gene:

TLL1

Ensembl Gene ID:

ENSAPLG00000013257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024678

65922058 - 66049390

127333

ENSAPLT00000013904

65923554 - 66049390

125837