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Intron Name: Anas_platyrhynchos_platyrhynchos_4_66027093_66029958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66027093 - 66029958

Intron Length:

2866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAA

U12 Branch Point Sequence:

TTTAGCTTAAAC

Flanking Amino Acid:

FEFFELEGNEVCKYDYVEIR

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

0.1

1.1

61.6

34.2

Major PPT

0.67

0.8

72.1

37.9

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

62.9

0.38

1.9

76.65

39.1

Associated Gene:

Gene:

TLL1

Ensembl Gene ID:

ENSAPLG00000013257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024678

65922058 - 66049390

127333

ENSAPLT00000013904

65923554 - 66049390

125837