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Intron Name: Anas_platyrhynchos_platyrhynchos_4_66038618_66043511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66038618 - 66043511

Intron Length:

4894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

SATPGQRVKLTFNEFEIEQH

Intron Amino Acid Position:

851

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

84.7

0.86

74.3

40.7

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

TLL1

Ensembl Gene ID:

ENSAPLG00000013257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024678

65922058 - 66049390

127333

ENSAPLT00000013904

65923554 - 66049390

125837