Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_66590992_66592757_F

Intron Information:

Intron Rank:

124269

Intron Class:

major

Intron Phase:

Intron Coordinates:

66590992 - 66592757

Intron Length:

1766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

CATCTCTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

33.6

Major BPS

83.8

0.84

73.6

41.8

Major PPT

0.56

0.9

69.7

35.3

Minor 5ss

40.4

-1.1

2.9

48.9

41.5

Minor BPS

63.3

0.5

1.2

72.66

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044558

66590897 - 66595199

4303