About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_66638883_66638990_R


Intron Information:

Intron Rank:
145456

Intron Class:
major

Intron Phase:

Intron Coordinates:
66638883 - 66638990

Intron Length:
108

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGCCTC

5'SS Class:
major

3'SS Sequence:
TTACAACTAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATCAT

U12 Branch Point Sequence:
TTACAACTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1
69.9
41.1

Major BPS
79.4
0.73
1
80.1
32

Major PPT
65.9
0.36
1
59.5
40.3

Minor 5ss
44.1
-0.6
3.1
60.3
38.4

Minor BPS
47.2
-0.2
2.1
65.64
39.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66638754 - 66649160
10407