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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_66755967_66757496_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
66755967 - 66757496
Intron Length:
1530

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGG|GTAATCCAG
5'SS Class:
major
3'SS Sequence:
TCTTTTCCCCAAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TAATAAA
U12 Branch Point Sequence:
TGATAATGAACA
Flanking Amino Acid:
CNKSYQQLWMVFQEFQNISG
Intron Amino Acid Position:
211

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
66.9
0.4
1.2
52.6
46
Major BPS
70.8
0.52
1
70.6
31.6
Major PPT
72.7
0.51
1
71.9
33.1
Minor 5ss
36.8
-1.5
3
39.4
46
Minor BPS
49.4
-0
1.9
65.11
39.9

Associated Gene:

Gene:
ANXA10
Ensembl Gene ID:
ENSAPLG00000007293
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007579
66737379 - 66761757
24379