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Intron Name: Anas_platyrhynchos_platyrhynchos_4_66758295_66760415_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
66758295 - 66760415

Intron Length:
2121

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTAAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
CTTTTCTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTCAC

U12 Branch Point Sequence:
GTTTCCTCACGT

Flanking Amino Acid:
FAYRLYNAIHEFGFHNKTVI

Intron Amino Acid Position:
263

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.5
0.72
1.3
81.8
38.5

Major BPS
72.4
0.56
1
73.5
32.5

Major PPT
93.5
0.98
0.6
92.1
18.4

Minor 5ss
38.8
-1.3
2.8
50.7
39.1

Minor BPS
52.6
0.16
2.1
76.98
45.2

Associated Gene:

Gene:
ANXA10

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66737379 - 66761757
24379

66737379 - 66761757
24379