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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_66760539_66761348_F

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
66760539 - 66761348
Intron Length:
810

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTAAGTTTT
5'SS Class:
strong_major
3'SS Sequence:
TTTTCTCTTGCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AAAAAAT
U12 Branch Point Sequence:
AGTCACAGAATT
Flanking Amino Acid:
YGKSLFHDIKHFASGHYERA
Intron Amino Acid Position:
304

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
89
0.92
0.8
90.7
21.1
Major BPS
54
0.1
1
59.7
32.6
Major PPT
93.2
0.97
0.6
88.8
20.4
Minor 5ss
47.8
-0.2
2.8
67.5
37.3
Minor BPS
45.7
-0.2
1.8
64.43
39

Associated Gene:

Gene:
ANXA10
Ensembl Gene ID:
ENSAPLG00000007293
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000019619
66737379 - 66761757
24379
ENSAPLT00000007579
66737379 - 66761757
24379