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Intron Name: Anas_platyrhynchos_platyrhynchos_4_66804355_66805235_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

66804355 - 66805235

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCATGTTCA

5'SS Class:

major

3'SS Sequence:

ACTAAATCTAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTTGAAA

Flanking Amino Acid:

HCKKQGMITKYLSKAVQLMR

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

64.3

41.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

56.2

0.14

1.1

53.2

Minor 5ss

38.7

-1.3

3.9

54.2

43.3

Minor BPS

68.8

0.58

1.3

78.58

Associated Gene:

Gene:

DDX60

Ensembl Gene ID:

ENSAPLG00000007120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007416

66774623 - 66820566

45944