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Intron Name: Anas_platyrhynchos_platyrhynchos_4_66901372_66903688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66901372 - 66903688

Intron Length:

2317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GATTATTGAATA

Flanking Amino Acid:

DSTSAEIFIEGASSTDSESE

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

53.4

0.1

1.6

63.46

36.4

Associated Gene:

Gene:

PALLD

Ensembl Gene ID:

ENSAPLG00000006750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029349

66842666 - 67030381

187716

ENSAPLT00000022756

66842666 - 67029369

186704

ENSAPLT00000007034

66842666 - 67030381

187716

ENSAPLT00000036365

66842666 - 67030854

188189

ENSAPLT00000032022

66842666 - 67030854

188189