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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67010658_67012158_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67010658 - 67012158

Intron Length:
1501

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTAACATT

5'SS Class:
major

3'SS Sequence:
TCTTGTTTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTAAT

U12 Branch Point Sequence:
TCTTGTTTGACA

Flanking Amino Acid:
SVVSPVDVQKEYKVSSFEQR

Intron Amino Acid Position:
985

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.51
1.2
76.3
39.1

Major BPS
74.4
0.61
0.9
73.6
28.6

Major PPT
78.9
0.65
1
75.5
38.3

Minor 5ss
41
-1
3
58.2
46.1

Minor BPS
63.1
0.4
1.8
73.66
38.8

Associated Gene:

Gene:
PALLD

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66842666 - 67030854
188189

66842666 - 67030381
187716

66842666 - 67029369
186704

66842666 - 67030381
187716