Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_67029215_67029318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67029215 - 67029318

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

CTTTTGTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTGTTTATAG

Flanking Amino Acid:

VSCTARLDVYISPQ*

Intron Amino Acid Position:

1394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

38.4

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

84.6

0.78

0.8

79.9

32.3

Minor 5ss

34.9

-1.7

3.2

45.2

38.1

Minor BPS

49.2

-0.1

2.1

64.12

Associated Gene:

Gene:

PALLD

Ensembl Gene ID:

ENSAPLG00000006750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022756

66842666 - 67029369

186704