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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67173089_67173652_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67173089 - 67173652

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TCATTAATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTCATTAATT

Flanking Amino Acid:

QVQSKPIMLDESDDLEAEML

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.8

0.54

0.9

71.4

38.3

Minor 5ss

-1.6

47.1

42.6

Minor BPS

71.9

0.77

1.5

83.58

37.4

Associated Gene:

Gene:

NEK1

Ensembl Gene ID:

ENSAPLG00000005269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018768

67162990 - 67201754

38765

ENSAPLT00000005529

67162990 - 67201754

38765

ENSAPLT00000041691

67162990 - 67201754

38765

ENSAPLT00000037057

67162990 - 67201786

38797

ENSAPLT00000030789

67162990 - 67201754

38765