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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67177567_67178129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67177567 - 67178129

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTGAATC

Flanking Amino Acid:

EREKRAWEEHLIAKGVKSPN

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.8

0.56

68.9

40.9

Minor 5ss

35.2

-1.7

45.1

42.9

Minor BPS

63.8

0.41

1.6

76.19

33.8

Associated Gene:

Gene:

NEK1

Ensembl Gene ID:

ENSAPLG00000005269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018768

67162990 - 67201754

38765

ENSAPLT00000005529

67162990 - 67201754

38765

ENSAPLT00000041691

67162990 - 67201754

38765

ENSAPLT00000037057

67162990 - 67201786

38797

ENSAPLT00000030789

67162990 - 67201754

38765