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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67181262_67182846_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

67181262 - 67182846

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGAAA

5'SS Class:

major

3'SS Sequence:

AAATGGCAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATACCATTAAAT

Flanking Amino Acid:

QNKARAEGHMGTLQNVADIY

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

69.3

36.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

49.5

-0

1.1

42.2

Minor 5ss

37.8

-1.4

3.1

44.4

45.6

Minor BPS

59.4

0.37

1.7

76.23

Associated Gene:

Gene:

NEK1

Ensembl Gene ID:

ENSAPLG00000005269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041691

67162990 - 67201754

38765

ENSAPLT00000037057

67162990 - 67201786

38797

ENSAPLT00000018768

67162990 - 67201754

38765

ENSAPLT00000005529

67162990 - 67201754

38765