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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67182950_67186490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67182950 - 67186490

Intron Length:

3541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TGTAATTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTGTTGTAATT

Flanking Amino Acid:

AEVRGREAVERQKGWLPAER

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.6

0.53

70.3

44.4

Minor 5ss

40.4

-1.1

3.3

55.6

48.6

Minor BPS

49.4

0.03

2.1

71.21

40.9

Associated Gene:

Gene:

NEK1

Ensembl Gene ID:

ENSAPLG00000005269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018768

67162990 - 67201754

38765