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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67243905_67246120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67243905 - 67246120

Intron Length:

2216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTACAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

GTTTCTACAACA

Flanking Amino Acid:

LVVTLTGLASGALAGLIDIA

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

76.9

34.6

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

72.4

0.5

67.4

37.9

Minor 5ss

47.5

-0.2

2.8

64.9

46.3

Minor BPS

0.25

1.8

73.68

37.7

Associated Gene:

Gene:

CLCN3

Ensembl Gene ID:

ENSAPLG00000004867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046839

67230136 - 67262908

32773

ENSAPLT00000045709

67230136 - 67262840

32705

ENSAPLT00000005048

67217924 - 67262908

44985