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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67247134_67248426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67247134 - 67248426

Intron Length:

1293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

AATACAGTAGCA

Flanking Amino Acid:

PYACGSGIPEIKTILSGFII

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

38.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

31.6

-2.1

3.2

38.5

46.7

Minor BPS

42.5

-0.5

2.3

57.45

41.2

Associated Gene:

Gene:

CLCN3

Ensembl Gene ID:

ENSAPLG00000004867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046839

67230136 - 67262908

32773

ENSAPLT00000045709

67230136 - 67262840

32705

ENSAPLT00000005048

67217924 - 67262908

44985