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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67248634_67249984_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67248634 - 67249984

Intron Length:

1351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

AATTCTTTACCT

Flanking Amino Acid:

YSTNEAKKREVLSAASAAGV

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

0.6

65.6

41.1

Major PPT

80.1

0.68

0.8

73.1

37.3

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

70.4

0.72

1.6

83.43

37.5

Associated Gene:

Gene:

CLCN3

Ensembl Gene ID:

ENSAPLG00000004867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046839

67230136 - 67262908

32773

ENSAPLT00000045709

67230136 - 67262840

32705

ENSAPLT00000005048

67217924 - 67262908

44985