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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67250066_67251312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67250066 - 67251312

Intron Length:

1247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGATCACTAACA

Flanking Amino Acid:

IGGVLFSLEEVSYYFPLKTL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.2

0.79

0.8

80.4

31.6

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

50.9

0.02

64.69

40.4

Associated Gene:

Gene:

CLCN3

Ensembl Gene ID:

ENSAPLG00000004867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046839

67230136 - 67262908

32773

ENSAPLT00000045709

67230136 - 67262840

32705

ENSAPLT00000005048

67217924 - 67262908

44985