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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67271945_67334586_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67271945 - 67334586

Intron Length:
62642

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGATTT

5'SS Class:
strong_major

3'SS Sequence:
TCCCTATCTGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GATTAAC

U12 Branch Point Sequence:
CTTTCCCTATCT

Flanking Amino Acid:
ASCSKRKRIKCEKNGDVKKR

Intron Amino Acid Position:
27

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.2
1.04
0.7
90.6
21.2

Major BPS
64.1
0.35
1.2
67.6
36.5

Major PPT
74.8
0.56
0.8
69.7
29.9

Minor 5ss
43.9
-0.7
3.2
64.8
46.5

Minor BPS
63
0.49
2
84.68
41.9

Associated Gene:

Gene:
MFAP3L

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67266796 - 67334994
68199