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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67384358_67385558_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
67384358 - 67385558

Intron Length:
1201

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAAGGCCA

5'SS Class:
major

3'SS Sequence:
TTCTTTCTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAGTAAT

U12 Branch Point Sequence:
ATTTCCTGTAGT

Flanking Amino Acid:
TDSFSKILSSGLRIGFLTGP

Intron Amino Acid Position:
386

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.4
0.67
1.1
63.2
42.9

Major BPS
76.6
0.66
1.1
75.9
36.3

Major PPT
87.3
0.84
0.6
81.2
30.9

Minor 5ss
30.6
-2.2
3.2
31.7
42.2

Minor BPS
54.9
0.23
2.1
79.38
42.2

Associated Gene:

Gene:
AADAT

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67377446 - 67394545
17100