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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67387173_67388939_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67387173 - 67388939

Intron Length:
1767

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGTATT

5'SS Class:
major

3'SS Sequence:
CTCCTGTCAACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATAAC

U12 Branch Point Sequence:
AGTATTATAACA

Flanking Amino Acid:
APTYAGTLAALRPLGCNIIN

Intron Amino Acid Position:
267

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1.1
84.2
33.6

Major BPS
77.9
0.69
1
78.3
31.3

Major PPT
70
0.45
0.9
64.9
35.1

Minor 5ss
44.6
-0.6
2.9
70.4
39.5

Minor BPS
52.4
0.07
1.6
63.99
35.7

Associated Gene:

Gene:
AADAT

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67377446 - 67394545
17100