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Intron Name: Anas_platyrhynchos_platyrhynchos_4_67389015_67389602_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67389015 - 67389602

Intron Length:
588

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGAACA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCTTTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATGTAAA

U12 Branch Point Sequence:
TTTTCTTTCACA

Flanking Amino Acid:
TTGSQEGLCKVFEMLINPGD

Intron Amino Acid Position:
242

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82
0.75
0.9
77.2
31

Major BPS
66.4
0.41
1.1
67.7
36.5

Major PPT
91.2
0.93
0.6
87.3
23.1

Minor 5ss
35.5
-1.6
2.9
42.3
38.1

Minor BPS
75.9
0.81
1.6
86.93
31.8

Associated Gene:

Gene:
AADAT

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67377446 - 67394545
17100