Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_67555705_67557339_F

Intron Information:

Intron Rank:

126868

Intron Class:

major

Intron Phase:

Intron Coordinates:

67555705 - 67557339

Intron Length:

1635

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGCTTCTGAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.8

83.4

32.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

63.2

0.3

1.1

58.3

41.2

Minor 5ss

22.2

-3.2

3.8

42.4

Minor BPS

57.1

0.2

1.6

65.07

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038175

67546299 - 67557681

11383

ENSAPLT00000025487

67546299 - 67557681

11383