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Intron Name: Anas_platyrhynchos_platyrhynchos_4_68053406_68077353_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

68053406 - 68077353

Intron Length:

23948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATACTTA

5'SS Class:

weak_major

3'SS Sequence:

CCTTCCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AGGCAAATAATT

Flanking Amino Acid:

ESIQKDAMRSGKGEHGKPYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

36.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

82.3

0.73

0.7

80.6

24.6

Minor 5ss

60.1

0.34

2.5

Minor BPS

42.2

-0.5

1.9

56.45

39.1

Associated Gene:

Gene:

GALNTL6

Ensembl Gene ID:

ENSAPLG00000003678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003934

67885840 - 68340827

454988

ENSAPLT00000003781

67885840 - 68340827

454988