Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_68258951_68264676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68258951 - 68264676

Intron Length:

5726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TTTCATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTACTTTCATT

Flanking Amino Acid:

VNVNWLPPLLNQIALNHKTI

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

31.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

90.2

0.91

0.7

88.4

28.3

Minor 5ss

38.1

-1.3

3.3

50.7

41.2

Minor BPS

58.7

0.35

1.8

75.87

41.7

Associated Gene:

Gene:

GALNTL6

Ensembl Gene ID:

ENSAPLG00000003678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003934

67885840 - 68340827

454988

ENSAPLT00000003781

67885840 - 68340827

454988