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Intron Name: Anas_platyrhynchos_platyrhynchos_4_68319119_68327436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68319119 - 68327436

Intron Length:

8318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTAATGTAAGA

Flanking Amino Acid:

VEPPPAAWGEIRNVAANLCV

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

83.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

82.4

0.73

0.9

76.3

37.7

Minor 5ss

28.5

-2.5

3.1

38.7

46.6

Minor BPS

45.1

-0.3

2.3

64.59

Associated Gene:

Gene:

GALNTL6

Ensembl Gene ID:

ENSAPLG00000003678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003934

67885840 - 68340827

454988

ENSAPLT00000003781

67885840 - 68340827

454988