Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_68335061_68340659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68335061 - 68340659

Intron Length:

5599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGATTC

5'SS Class:

major

3'SS Sequence:

CTCATTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGCTACTTAATT

Flanking Amino Acid:

KGNQHWSYRKDKTLFHPVSS

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.2

75.9

34.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.56

0.8

69.7

Minor 5ss

37.9

-1.4

3.1

50.9

45.7

Minor BPS

71.3

0.75

1.5

81.75

39.8

Associated Gene:

Gene:

GALNTL6

Ensembl Gene ID:

ENSAPLG00000003678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003934

67885840 - 68340827

454988

ENSAPLT00000003781

67885840 - 68340827

454988