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Intron Name: Anas_platyrhynchos_platyrhynchos_4_68345590_68454081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68345590 - 68454081

Intron Length:

108492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCTG

5'SS Class:

major

3'SS Sequence:

AACTTACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCTTTCAAAACT

Flanking Amino Acid:

SKSDAGKKGPGRARSSKCDV

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

73.4

0.53

0.9

63.1

42.4

Minor 5ss

40.1

-1.1

3.4

55.3

48.9

Minor BPS

57.9

0.33

80.09

42.1

Associated Gene:

Gene:

HMGB2

Ensembl Gene ID:

ENSAPLG00000003284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027202

68345504 - 68455300

109797