Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_68425410_68426822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68425410 - 68426822

Intron Length:

1413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTC

5'SS Class:

strong_major

3'SS Sequence:

ATAAACGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

CCTTCTATAAAC

Flanking Amino Acid:

APLIAPISKDRTTCTVPLID

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

75.8

34.6

Major BPS

66.3

0.4

1.1

34.4

Major PPT

64.8

0.33

1.1

46.1

Minor 5ss

41.4

-1

3.3

58.9

45.9

Minor BPS

54.1

0.11

1.8

64.09

41.6

Associated Gene:

Gene:

GALNT7

Ensembl Gene ID:

ENSAPLG00000003409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027096

68393805 - 68434623

40819