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Intron Name: Anas_platyrhynchos_platyrhynchos_4_68454137_68454608_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68454137 - 68454608

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTGA

5'SS Class:

major

3'SS Sequence:

ATCTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

CTACCAGCAACT

Flanking Amino Acid:

AAKLKEKYEKDIAAYRAKSK

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.1

41.3

Major BPS

0.45

0.9

67.6

25.3

Major PPT

86.2

0.81

0.7

81.1

30.2

Minor 5ss

34.4

-1.8

3.5

47.2

48.2

Minor BPS

-0.4

2.3

64.08

45.5

Associated Gene:

Gene:

HMGB2

Ensembl Gene ID:

ENSAPLG00000003284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003355

68453653 - 68455514

1862

ENSAPLT00000027202

68345504 - 68455300

109797