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Intron Name: Anas_platyrhynchos_platyrhynchos_4_68454784_68454880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68454784 - 68454880

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTGAGTGGT

5'SS Class:

major

3'SS Sequence:

TCTCACATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ACTTGCCTAACC

Flanking Amino Acid:

KKDPNAPKRPPSAFFLFCSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.3

63.5

42.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

73.8

0.54

0.8

70.7

34.4

Minor 5ss

30.8

-2.2

3.3

44.7

43.5

Minor BPS

54.6

0.12

2.1

69.38

Associated Gene:

Gene:

HMGB2

Ensembl Gene ID:

ENSAPLG00000003284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027202

68345504 - 68455300

109797

ENSAPLT00000003355

68453653 - 68455514

1862