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Intron Name: Anas_platyrhynchos_platyrhynchos_4_68455027_68455129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68455027 - 68455129

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTGTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAG

U12 Branch Point Sequence:

GTTCCCTCCCCT

Flanking Amino Acid:

FSRKCSERWKTMSSKEKGKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

58.6

0.21

1.5

57.1

41.8

Major PPT

72.8

0.51

65.3

41.1

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

38.8

-0.7

3.6

70.65

45.7

Associated Gene:

Gene:

HMGB2

Ensembl Gene ID:

ENSAPLG00000003284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027202

68345504 - 68455300

109797

ENSAPLT00000003355

68453653 - 68455514

1862