Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_68842878_68843227_F

Intron Information:

Intron Rank:

147862

Intron Class:

major

Intron Phase:

Intron Coordinates:

68842878 - 68843227

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCAG

5'SS Class:

major

3'SS Sequence:

CACCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TGTTCCGCACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

62.1

44.1

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

0.41

0.8

61.3

28.6

Minor 5ss

36.6

-1.5

3.1

46.7

48.6

Minor BPS

-0.2

2.4

67.35

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034352

68841316 - 68844256

2941