Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_68842878_68846263_F

Intron Information:

Intron Rank:

147864

Intron Class:

major

Intron Phase:

Intron Coordinates:

68842878 - 68846263

Intron Length:

3386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCAG

5'SS Class:

major

3'SS Sequence:

CTTTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

CTCTTTGTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

62.1

44.1

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

86.3

0.82

0.8

80.6

31.4

Minor 5ss

36.6

-1.5

3.1

46.7

48.6

Minor BPS

48.1

-0.1

60.52

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039243

68841472 - 68846315

4844