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Intron Name: Anas_platyrhynchos_platyrhynchos_4_68856832_68858462_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
68856832 - 68858462

Intron Length:
1631

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTTGA

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTCTACCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTCTAAT

U12 Branch Point Sequence:
TTTTCTTCTACC

Flanking Amino Acid:
WKKLRIYLDERRDVLDDLVT

Intron Amino Acid Position:
192

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.9
0.75
1.1
75
38.1

Major BPS
82.2
0.8
0.9
81.6
27

Major PPT
83.8
0.76
0.8
78.3
34.9

Minor 5ss
45.1
-0.5
2.6
59
45.4

Minor BPS
63.1
0.4
1.9
79
36.5

Associated Gene:

Gene:
FBXO8

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

68855690 - 68873271
17582

68855690 - 68872264
16575